MultiBarcodeTools
v2024.02
MultiBarcodeSelector
Run MultiBarcodeSelector
TaxID Mapping
List of Barcodes
34
List of Species
3975
MultiBarcodeMap
Pipeline
Help
References
Our Group
Error ‼️
MultiBarcodeMap: in/around Japan
Step 1. Choose a region on the map
Help
Marine
Freshwater
Step 2. Confirm parameters, then submit
Selected Region
None
Parameters
Help
Diff. between the most closely related amplicons (bp)
~
Amplicon length (bp)
~
No. of barcodes
≤
Only use these loci (Optional)
12S
16S
COX1
CYTB
Preferred
barcodes
(Optional, in order)
Miya-MiFish_U-12S
Miya-MiFish_E-12S
Taberlet-elas02-12S
Taberlet-tele02-12S
Evans-Am12S
Kelly-12S
Evans-Ac12S
Riaz-Vert_12S
Bylemans-AcMDB07-12S
Valentini-Teleo-12S
Evans-Ac16S
Palumbi-16S
Kitano-16S
McInnes-16S_Fish
Vences-Vert_16S
Evans-Ve16s
Shaw-16S
Berry-fish-16S
Ivanova-VF1i-COX1
Ivanova-VF1d-COX1
Ivanova-FF2d-COX1
Ward-barcode-COX1
Weigt-FISHCOI
Ward-FishF2-COX1
West-FishF1-COX1
West-FishF2-COX1
Balasingham-PS1-COX1
Collins-SeaDNA_mid-COX1
Collins-SeaDNA_short-COX1
Wangensteen-Leray_XT-COX1
Minamoto-fish-CYTB
Thomsen-FishCBL-CYTB
Thomsen-Fish2degCBL-CYTB
Thomsen-Fish2CBL-CYTB
Submit
Current Task
Current Message
Recommend Barcodes
Help
Rank
Name
Amplicon Len
No. Resolved Species
All Species
Unresolved Species
See Full List
Download in Excel
Help
Target Species
Closely Related Species
Photo
From FishBase.
🐟 not available
🐟 not available
Occurrence
Red: Target
Green: Closely Related
Maybe unavailable
for some taxes
TaxID
Scientific Name
Common Name
RefSeq ID
Body Shape
Common Length (cm)
Common Weight (g)
Environment
Depth range (m)
Human uses
Threat to humans
IUCN Red List Status
Diff. in amplicon (bp)
Closely related species in other barcodes
CSV
MS-Excel (OpenXML)
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NCBI TaxID
Scientific Name
Common Name
No matching records found
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